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Research Paper, 7 pages (1700 words)

Editorial: developments in campylobacter, helicobacter & related organisms research – chro 2019

Editorial on the Research Topic

Campylobacter spp. and Helicobacter spp. are important gastrointestinal pathogens that are major causes of acute gastroenteritis and gastric disease, respectively ( Polk and Peek, 2010 ; Gundogdu and Wren, 2020 ). Campylobacter spp. are considered the leading bacterial cause of human gastroenteritis. In low-resource settings, Campylobacter infections are common in young children and correlate with stunted growth and life-long physical and cognitive deficiencies ( Amour et al., 2016 ). In high-resource regions, an estimated 1 in every 100 individuals develop a Campylobacter -related illness each year. Helicobacter spp. can colonize the human stomach and increase the risk of ulcers and stomach cancer ( Salama et al., 2013 ). Helicobacter pylori is the most common species with some reports indicating up to 50% of the population are infected ( Brown, 2000 ). Both Campylobacter spp. and Helicobacter spp. possess a plethora of survival and virulence factors that have allowed them to survive and persist successfully ( Gundogdu et al., 2016 ; Hathroubi et al., 2018 ; Capurro et al., 2019 ; El Abbar et al., 2019 ; Liaw et al., 2019 ). For both Campylobacter spp. and Helicobacter spp., contaminated foods play an important role in the transmission of the microorganism to humans ( Tegtmeyer et al., 2017 ; Ijaz et al., 2018 ; Quaglia and Dambrosio, 2018 ; Sibanda et al., 2018 ; McKenna et al., 2020 ).

The 20th International workshop on Campylobacter, Helicobacter , and Related Organisms (CHRO) was held in Belfast, Northern Ireland from September 8–11th, 2019. This biennial conference provided researchers with an opportunity to display the most recent findings in our understanding of Campylobacter, Helicobacter , and related organisms. The conference showcased the research from different topics ranging from pathogenicity and virulence factors; poultry and non-poultry epidemiology and ecology; emerging and related species; control strategies; outbreak/epidemiology and public health; detection methods and characterization; antibiotics and antimicrobials; bioinformatics, and genomics and evolution; immunology and host response. This Frontiers Research Topic provides a framework to showcase a selection of this current research.

A number of manuscripts focussed on the association between Campylobacter and poultry, indicating the growing importance of this research field. described an optimized Loop Mediated Isothermal Amplification (LAMP) method for rapid detection of Campylobacter spp. in broilers, with increased specificity and sensitivity. investigated the prebiotic galacto-oligosaccharide (GOS) on broiler chickens colonized with C. jejuni . The authors identified that GOS-fed birds had increased growth performance, however an increased IL-17A did not prevent colonization with C. jejuni . investigated the use of bacteriophages to control Campylobacter in commercially farmed broiler chickens in Australia. investigated the physiological and morphological changes on Campylobacter isolates from chicken meat that were induced with chlorine.

Studies also continued to investigate the genomics and epidemiology of strains from different sources around the globe. described the genetic diversity of C. jejuni strains isolated from avian and human sources from Egypt. investigated the co-occurrence of Campylobacter spp. in children from eastern Ethiopia and their association with environmental enteric dysfunction, diarrhea, and host microbiome. The authors highlighted the association between specific microbiome composition and gut permeability, gut inflammation, enteric dysfunction severity, and diarrhea. investigated C. jejuni strain dynamics in a raccoon population in southern Ontario, Canada. The authors noted that due to a high prevalence and rapid subtype turnover, racoons may act as vectors in the transmission of clinically relevant C. jejuni subtypes at the interface of rural, urban, and more natural environments. described recovery bias of common C. jejuni subtypes in mixed cultures. The authors emphasized the importance of selecting multiple colonies per sample, using both enrichment and non-enrichment isolation procedures to maximize the probability of recovering multiple subtypes present in a sample. discussed the routes of infection of C. hepaticus which causes spotty liver disease in chickens. The authors highlighted that environmental sources are a likely transmission source of C. hepaticus .

In relation to survival, analyzed the transcriptomic differences in C. jejuni and C. coli when exposed to elevated temperatures of 46°C, identifying several chaperones with increased gene expression indicative of a general involvement within heat stress response. described methods to detect and quantify C. jejuni from the viable but non-culturable (VBNC) state. The authors discuss the use of PMA-qPCR as a rapid, specific and sensitive method for the detection and quantification of VBNC C. jejuni .

Research focussing on immunology and host response was presented by who discussed the impact of epithelial apoptosis and subepithelial immune responses in C. jejuni -induced barrier disruption. The authors highlighted that C. jejuni infection and the consequent subepithelial immune activation leads to intestinal barrier dysfunction predominantly through caspase-3-dependent epithelial apoptosis. Pathogenicity and virulence factors were investigated by who describe a putative novel role for FlhF in terms of directly regulating flagellar genes and further our understanding of FlhF in relation to Campylobacter flagellar biosynthesis and flagellation. provided a comprehensive review of Campylobacter adherence and invasion, specifically focussing on fibronectin and binding from CadF and FlpA adhesins. investigated the membrane proteocomplexome of C. jejuni using 2-D blue native/SDS-PAGE in conjunction with bioinformatic analysis. The authors identified a range of membrane protein complexes (MCPs) in C. jejuni 81–176 where these MCPs are involved in protein folding, molecules trafficking, oxidative phosphorylation, membrane structuration, peptidoglycan biosynthesis, motility and chemotaxis, stress signaling, efflux pumps, and virulence. discussed the influence of protein glycosylation on C. fetus physiology. The authors used label-free quantitative (LFQ) proteomics, identifying more than 100 proteins significantly altered in expression in two C. fetus subsp. fetus protein glycosylation ( pgl ) mutants ( pglX and pglJ ) compared to the wild-type strain. The authors provided a study which gives insight into the unique protein N-glycosylation pathway of C. fetus , but also expands our knowledge on the influence of protein N-glycosylation on Campylobacter cell physiology. performed a genome-scale metabolic model driven design of a medium for C. jejuni M1cam strain. The authors showed that with a well-curated metabolic model, it is possible to design media to grow Campylobacter and that this has implications for the study of new Campylobacter species defined through metagenomics.

This Research Topic will increase the knowledge base and understanding of the processes of survival of Campylobacter spp. and Helicobacter spp. within the environment, in particular, relating to food safety, and to host-pathogen interactions.

Author Contributions

All authors contributed to the drafting of the editorial.

Conflict of Interest

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

References

Amour, C., Gratz, J., Mduma, E., Svensen, E., Rogawski, E. T., Mcgrath, M., et al. (2016). Epidemiology and impact of Campylobacter infection in children in 8 low-resource settings: results from the MAL-ED study. Clin. Infect. Dis. 63, 1171–1179. doi: 10. 1093/cid/ciw542

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Brown, L. M. (2000). Helicobacter pylori : epidemiology and routes of transmission. Epidemiol. Rev. 22, 283–297. doi: 10. 1093/oxfordjournals. epirev. a018040

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Capurro, M. I., Greenfield, L. K., Prashar, A., Xia, S., Abdullah, M., Wong, H., et al. (2019). VacA generates a protective intracellular reservoir for Helicobacter pylori that is eliminated by activation of the lysosomal calcium channel TRPML1. Nat. Microbiol. 4, 1411–1423. doi: 10. 1038/s41564-019-0441-6

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El Abbar, F. M., Li, J., Owen, H. C., Daugherty, C. L., Fulmer, C. A., Bogacz, M., et al. (2019). RNA Binding by the Campylobacter jejuni post-transcriptional regulator CsrA. Front. Microbiol. 10: 1776. doi: 10. 3389/fmicb. 2019. 01776

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Gundogdu, O., Da Silva, D. T., Mohammad, B., Elmi, A., Wren, B. W., Van Vliet, A. H., et al. (2016). The Campylobacter jejuni oxidative stress regulator RrpB is associated with a genomic hypervariable region and altered oxidative stress resistance. Front. Microbiol. 7: 2117. doi: 10. 3389/fmicb. 2016. 02117

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Gundogdu, O., and Wren, B. W. (2020). Microbe profile: Campylobacter jejuni –survival instincts. Microbiology 166, 230–232. doi: 10. 1099/mic. 0. 000906

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Hathroubi, S., Zerebinski, J., and Ottemann, K. M. (2018). Helicobacter pylori biofilm involves a multigene stress-biased response, including a structural role for flagella. mBio 9: e01973-18. doi: 10. 1128/mBio. 01973-18

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Ijaz, U. Z., Sivaloganathan, L., McKenna, A., Richmond, A., Kelly, C., Linton, M., et al. (2018). Comprehensive longitudinal microbiome analysis of the chicken cecum reveals a shift from competitive to environmental drivers and a window of opportunity for Campylobacter . Front. Microbiol. 9: 2452. doi: 10. 3389/fmicb. 2018. 02452

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Liaw, J., Hong, G., Davies, C., Elmi, A., Sima, F., Stratakos, A., et al. (2019). The Campylobacter jejuni type VI secretion system enhances the oxidative stress response and host colonization. Front. Microbiol. 10: 2864. doi: 10. 3389/fmicb. 2019. 02864

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McKenna, A., Ijaz, U. Z., Kelly, C., Linton, M., Sloan, W. T., Green, B. D., et al. (2020). Impact of industrial production system parameters on chicken microbiomes: mechanisms to improve performance and reduce Campylobacter . Microbiome 8: 128. doi: 10. 1186/s40168-020-00908-8

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Polk, D. B., and Peek, R. M. Jr. (2010). Helicobacter pylori : gastric cancer and beyond. Nat. Rev. Cancer 10, 403–414. doi: 10. 1038/nrc2857

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Quaglia, N. C., and Dambrosio, A. (2018). Helicobacter pylori : a foodborne pathogen? World J. Gastroenterol. 24, 3472–3487. doi: 10. 3748/wjg. v24. i31. 3472

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Salama, N. R., Hartung, M. L., and Muller, A. (2013). Life in the human stomach: persistence strategies of the bacterial pathogen Helicobacter pylori . Nat. Rev. Microbiol. 11, 385–399. doi: 10. 1038/nrmicro3016

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Sibanda, N., McKenna, A., Richmond, A., Ricke, S. C., Callaway, T., Stratakos, A. C., et al. (2018). A review of the effect of management practices on Campylobacter prevalence in poultry farms. Front. Microbiol. 9: 2002. doi: 10. 3389/fmicb. 2018. 02002

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Tegtmeyer, N., Wessler, S., Necchi, V., Rohde, M., Harrer, A., Rau, T. T., et al. (2017). Helicobacter pylori employs a unique basolateral type IV secretion mechanism for CagA delivery. Cell Host Microbe 22, 552. e5–560. e5. doi: 10. 1016/j. chom. 2017. 09. 005

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